Abed, Raeid M. M., Tamm, Alexandra, Hassenrück, Christiane, Al-Rawahi, Ahmed N., Rodríguez-Caballero, Emilio, Fiedler, Sabine, Maier, Stefanie and Weber, Bettina (2019) Habitat-dependent composition of bacterial and fungal communities in biological soil crusts from Oman. Scientific Reports, 9 (1). DOI https://doi.org/10.1038/s41598-019-42911-6.

Adyasari, Dini, Hassenrueck, Christiane, Montiel, Daniel and Dimova, Natasha (2020) Microbial community composition across a coastal hydrological system affected by submarine groundwater discharge (SGD). PLOS ONE, 15(6) (e0235235). DOI https://doi. org/10.1371/journal.pone.0235235.

Alfiansah, Yustian ORCID: https://orcid.org/0000-0002-1640-9834, Hassenrück, Christiane, Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332, Taslihan, Arief, Harder, Jens and Gärdes, Astrid (2018) Bacterial Abundance and Community Composition in Pond Water From Shrimp Aquaculture Systems With Different Stocking Densities. Frontiers in Microbiology, 9 . p. 2457. DOI https://doi.org/10.3389/fmicb.2018.02457.

Alfiansah, Yustian ORCID: https://orcid.org/0000-0002-1640-9834, Peters, Sonja, Harder, Jens, Hassenrück, Christiane and Gärdes, Astrid (2020) Structure and co-occurrence patterns of bacterial communities associated with white faeces disease outbreaks in Pacific white-leg shrimp Penaeus vannamei aquaculture. Scientific Reports, 10 (1). DOI https://doi.org/10.1038/s41598-020-68891-6.

Bachmann, Jennifer, Heimbach, Tabea, Hassenrück, Christiane, Kopprio, German, Iversen, Morten Hvitfeldt, Grossart, Hans Peter and Gärdes, Astrid (2018) Environmental Drivers of Free-Living vs. Particle-Attached Bacterial Community Composition in the Mauritania Upwelling System. Frontiers in Microbiology, 9 . p. 2836. DOI https://doi.org/10.3389/fmicb.2018.02836.

Baum, Gunilla, Kegler, P, Scholz-Böttcher, B.M., Alfiansah, Yustian ORCID: https://orcid.org/0000-0002-1640-9834, Abrar, M. and Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332 (2016) Metabolic performance of the coral reef fish Siganus guttatus exposed to combinations of water borne diesel, an anionic surfactant and elevated temperature in Indonesia. Marine Pollution Bulletin, 110 (2). pp. 735-746. DOI https://doi.org/10.1016/j.marpolbul.2016.02.078.

Biancalana, Florencia, Kopprio, Germán A., Lara, Rubén J. and Alonso, Cecilia (2017) A protocol for the simultaneous identification of chitin-containing particles and their associated bacteria. Systematic and Applied Microbiology, 40 (5). pp. 314-320. DOI https://doi.org/10.1016/j.syapm.2017.05.004.

Cardenas, Anny, Meyer, Friedrich, Schwieder, Hauke, Wild, Christian and Gärdes, Astrid (2015) The formation of aggregates in coral reef waters under elevated concentrations of dissolved inorganic and organic carbon: A mesocosm approach. Marine Chemistry, 175 . pp. 47-55. DOI https://doi.org/10.1016/j.marchem.2015.04.002.

Cardenas, Anny, Neave, Matthew J, Haroon, Mohamed Fauzi, Pogoreutz, Claudia, Rädecker, Nils, Wild, Christian, Gärdes, Astrid and Voolstra, Christian R (2017) Excess labile carbon promotes the expression of virulence factors in coral reef bacterioplankton. The ISME Journal, 12 (1). pp. 59-76. DOI https://doi.org/10.1038/ismej.2017.142.

Dhal, Paltu Kumar, Kopprio, Germán A. and Gärdes, Astrid (2020) Insights on aquatic microbiome of the Indian Sundarbans mangrove areas. PLOS ONE, 15 (2). e0221543. DOI https://doi.org/10.1371/journal.pone.0221543.

Fricke, A. ORCID: https://orcid.org/0000-0003-1188-0114, Kihara, T.C., Kopprio, G.A. and Hoppenrath, M. (2017) Anthropogenically driven habitat formation by a tube dwelling diatom on the Northern Patagonian Atlantic coast. Ecological Indicators, 77 . pp. 8-13. DOI https://doi.org/10.1016/j.ecolind.2017.01.040.

Ghosh, Shuvankar, Proisy, Christophe, Muthusankar, Gowrappan, Hassenrück, Christiane ORCID: https://orcid.org/0000-0003-1909-1726, Helfer, Véronique ORCID: https://orcid.org/0000-0001-5923-5291, Mathevet, Raphaël, Andrieu, Julien, Balachandran, Natesan and Narendran, Rajendran (2022) Multiscale Diagnosis of Mangrove Status in Data-Poor Context Using Very High Spatial Resolution Satellite Images: A Case Study in Pichavaram Mangrove Forest, Tamil Nadu, India.. Remote Sensing, 14 (10). p. 2317. DOI https://doi.org/10.3390/rs14102317.

Guevara Campoverde, N.C., Hassenrück, C., Buttigieg, P.L. and Gärdes, A. (2018) Characterization of bacterioplankton communities and quantification of organic carbon pools off the Galapagos Archipelago under contrasting environmental conditions. PeerJ, 6 . e5984. DOI https://doi.org/10.7717/peerj.5984.

Hanke, Inken, Ampe, Bart, Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332, Gärdes, Astrid and Aerts, Johan (2019) Thermal stress response of juvenile milkfish (Chanos chanos) quantified by ontogenetic and regenerated scale cortisol. Aquaculture, 500 . pp. 24-30. DOI https://doi.org/10.1016/j.aquaculture.2018.09.016.

Hanke, Inken, Hassenrück, Christiane, Ampe, Bart, Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332, Gärdes, Astrid and Aerts, Johan (2020) Chronic stress under commercial aquaculture conditions: Scale cortisol to identify and quantify potential stressors in milkfish (Chanos chanos) mariculture. Aquaculture, 526 . p. 735352. DOI https://doi.org/10.1016/j.aquaculture.2020.735352.

Herz, Nicole, Ferse, Sebastian C.A. ORCID: https://orcid.org/0000-0003-0930-5356, Alfiansah, Yustian ORCID: https://orcid.org/0000-0002-1640-9834 and Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332 (2016) High-performance liquid chromatography to detect thiocyanate in reef fish caught with cyanide: A practical field application. SPC Live Reef Fish Information Bulletin, 21 . pp. 8-16.

Kegler, Hauke, Lukman, Muhammad, Teichberg, Mirta ORCID: https://orcid.org/0000-0003-1586-738X, Plass-Johnson, Jeremiah, Hassenrück, Christiane, Wild, Christian and Gärdes, Astrid (2017) Bacterial Community Composition and Potential Driving Factors in Different Reef Habitats of the Spermonde Archipelago, Indonesia. Frontiers in Microbiology, 8 . p. 662. DOI https://doi.org/10.3389/fmicb.2017.00662.

Kegler, Hauke F., Hassenrück, Christiane, Kegler, Pia, Jennerjahn, Tim C. ORCID: https://orcid.org/0000-0003-1022-5126, Lukman, Muhammad, Jompa, Jamaluddin and Gärdes, Astrid (2018) Small tropical islands with dense human population: differences in water quality of near-shore waters are associated with distinct bacterial communities. PeerJ, 6 . e4555. DOI https://doi.org/10.7717/peerj.4555.

Kegler, Pia, Kegler, Hauke, Gärdes, Astrid, Ferse, Sebastian ORCID: https://orcid.org/0000-0003-0930-5356, Lukman, Muhammad, Alfiansah, Yustian ORCID: https://orcid.org/0000-0002-1640-9834, Hassenrück, Christiane and Kunzmann, Andreas (2017) Bacterial Biofilm Communities and Coral Larvae Settlement at Different Levels of Anthropogenic Impact in the Spermonde Archipelago, Indonesia. Frontiers in Marine Science, 4 . p. 270. DOI https://doi.org/10.3389/fmars.2017.00270.

Kopprio, German, Neogi, Sucharit B., Rashid, Harunur, Alonso, Cecilia, Yamasaki, Shinji, Koch, Boris P., Gärdes, Astrid and Lara, Rubén J. (2020) Vibrio and Bacterial Communities Across a Pollution Gradient in the Bay of Bengal: Unraveling Their Biogeochemical Drivers. Frontiers in Microbiology, 11 . p. 594. DOI https://doi.org/10.3389/fmicb.2020.00594.

Kopprio, German, Streitenberger, M. Eugenia, Okuno, Kentaro, Baldini, Mónica, Biancalana, Florencia, Fricke, Anna ORCID: https://orcid.org/0000-0003-1188-0114, Martínez, Ana, Neogi, Sucharit B., Koch, Boris P., Yamasaki, Shinji and Lara, Rubén J. (2017) Biogeochemical and hydrological drivers of the dynamics of Vibrio species in two Patagonian estuaries. Science of The Total Environment, 579 . pp. 646-656. DOI https://doi.org/10.1016/j.scitotenv.2016.11.045.

Kopprio, German A, Kattner, G, Graeve, M, Freije, RH and Lara, RJ (2012) Exceptional lipid storage mode of the copepod Boeckella poopoensis in a pampean salt lake, Argentina. Aquatic Biology, 15 (3). pp. 275-281. DOI https://doi.org/10.3354/ab00432.

Kopprio, German A., Dutto, M.S., Garzón Cardona, J.E., Gärdes, Astrid, Lara, R.J. and Graeve, M. (2018) Biogeochemical markers across a pollution gradient in a Patagonian estuary: A multidimensional approach of fatty acids and stable isotopes. Marine Pollution Bulletin, 137 . pp. 617-626. DOI https://doi.org/10.1016/j.marpolbul.2018.10.059.

Kopprio, German A., Freije, R. H., Strüssmann, C. A., Kattner, G., Hoffmeyer, M. S., Popovich, C. A. and Lara, R. J. (2010) Vulnerability of pejerrey Odontesthes bonariensis populations to climate change in pampean lakes of Argentina. Journal of Fish Biology, 77 (8). pp. 1856-1866. DOI https://doi.org/10.1111/j.1095-8649.2010.02750.x.

Kopprio, German A., Kattner, Gerhard, Freije, R. Hugo, de Paggi, Susana José and Lara, Rubén J. (2014) Seasonal baseline of nutrients and stable isotopes in a saline lake of Argentina: biogeochemical processes and river runoff effects. Environmental Monitoring and Assessment, 186 (5). pp. 3139-3148. DOI https://doi.org/10.1007/s10661-013-3606-4.

Kopprio, Germán A., Cuong, Le Huu, Luyen, Nguyen Dinh, Duc, Tran Mai, Ha, Tran Hong, Huong, Le Mai and Gärdes, Astrid (2021) Carrageenophyte-attached and planktonic bacterial communities in two distinct bays of Vietnam: Eutrophication indicators and insights on ice-ice disease. Ecological Indicators, 121 . p. 107067. DOI https://doi.org/10.1016/j.ecolind.2020.107067.

Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332, Todinanahary, Gildas, Msuya, Flower E. and Alfiansah, Yustian ORCID: https://orcid.org/0000-0002-1640-9834 (2023) Review: Comparative Environmental Impacts and Development Benefits of Coastal Aquaculture in Three Tropical Countries: Madagascar, Tanzania and Indonesia. Tropical Life Sciences Research, 34 (3). DOI https://doi.org/10.21315/tlsr2023.34.3.15.

Luyen, Nguyen Dinh, Huong, Le Mai, Thi Hong Ha, Tran, Cuong, Le Huu, Thi Hai Yen, Duong, Nhiem, Nguyen Xuan, Tai, Bui Huu, Gärdes, Astrid, Kopprio, German and Van Kiem, Phan (2019) Aspermicrones A-C, novel dibenzospiroketals from the seaweed-derived endophytic fungus Aspergillus micronesiensis. The Journal of Antibiotics, 72 (11). pp. 843-847. DOI https://doi.org/10.1038/s41429-019-0214-8.

Moncada, Chyrene, Hassenrück, Christiane, Gärdes, Astrid and Conaco, Cecilia (2019) Microbial community composition of sediments influenced by intensive mariculture activity. FEMS Microbiology Ecology, 95 (2). DOI https://doi.org/10.1093/femsec/fiz006.

Neogi, Sucharit Basu, Dey, Mouri, Kabir, SM Lutful, Masum, Syed Jahangir H, Kopprio, German, Yamasaki, Shinji and Lara, Rubén (2017) Sundarban mangroves: diversity, ecosystem services and climate change impacts. Asian Journal of Medical and Biological Research, 2 (4). pp. 488-507. DOI https://doi.org/10.3329/ajmbr.v2i4.30988.

Plass-Johnson, Jeremiah G., Teichberg, Mirta, Bednarz, Vanessa N., Gärdes, Astrid, Heiden, Jasmin P., Lukman, Muhammad, Miñarro, Sara, Kegler, Hauke, Weiand, Laura, Wild, Christian, Reuter, Hauke and Ferse, Sebastian C. A. (2018) Spatio-Temporal Patterns in the Coral Reef Communities of the Spermonde Archipelago, 2012–2014, II: Fish Assemblages Display Structured Variation Related to Benthic Condition. Frontiers in Marine Science, 5 . DOI https://doi.org/10.3389/fmars.2018.00036.

Pogoreutz, Claudia, Rädecker, Nils, Cardenas, Anny, Gärdes, Astrid, Voolstra, Christian R. and Wild, Christian (2017) Sugar enrichment provides evidence for a role of nitrogen fixation in coral bleaching. Global Change Biology, 23 (9). pp. 3838-3848. DOI https://doi.org/10.1111/gcb.13695.

Pogoreutz, Claudia, Rädecker, Nils, Cardenas, Anny, Gärdes, Astrid, Wild, Christian and Voolstra, Christian R. (2018) Dominance of Endozoicomonas bacteria throughout coral bleaching and mortality suggests structural inflexibility of the Pocillopora verrucosa microbiome. Ecology and Evolution, 8 (4). pp. 2240-2252. DOI https://doi.org/10.1002/ece3.3830.

Vollberg, Felix, Walther, M., Gärdes, Astrid and Moosdorf, Nils ORCID: https://orcid.org/0000-0003-2822-8261 (2019) Modeling the Potential of Submarine Groundwater Discharge to Facilitate Growth of Vibrio cholerae Bacteria. Hydrology, 6 (2). p. 39. DOI https://doi.org/10.3390/hydrology6020039.

Vollstedt, Svea, Xiang, Nan, Simancas-Giraldo, Susana Marcela and Wild, Christian (2020) Organic eutrophication increases resistance of the pulsating soft coral Xenia umbellata to warming. PeerJ, 8 . e9182. DOI https://doi.org/10.7717/peerj.9182.

Xiang, Nan, Hassenrück, Christiane ORCID: https://orcid.org/0000-0003-1909-1726, Pogoreutz, Claudia, Rädecker, Nils, Simancas-Giraldo, Susana Marcela, Voolstra, Christian R., Wild, Christian, Gärdes, Astrid and Zhou, Ning-Yi (2022) Contrasting Microbiome Dynamics of Putative Denitrifying Bacteria in Two Octocoral Species Exposed to Dissolved Organic Carbon (DOC) and Warming. Applied and Environmental Microbiology, 88 (2). DOI https://doi.org/10.1128/AEM.01886-21.

Xiang, Nan, Meyer, Achim ORCID: https://orcid.org/0000-0002-4345-274X, Pogoreutz, Claudia, Rädecker, Nils, Voolstra, Christian R., Wild, Christian and Gärdes, Astrid (2023) Excess labile carbon promotes diazotroph abundance in heat-stressed octocorals. Royal Society Open Science, 10 (3). DOI https://doi.org/10.1098/rsos.221268.

Pogoreutz, Claudia, Rädecker, Nils, Cárdenas, Anny, Gärdes, Astrid, Wild, Christian and Voolstra, Christian R. (2017) Nitrogen Fixation Aligns with nifH Abundance and Expression in Two Coral Trophic Functional Groups. Frontiers in Microbiology, 8 . DOI https://doi.org/10.3389/fmicb.2017.01187.

Gärdes, Astrid (2017) Im Reich der vier Könige: West Papua Hochburg der Biodiversität. In: Klüger nutzen – besser schützen – Bremer Forschung an tropischen Küsten. , ed. by Hempel, Gotthilf, Hempel, I and Hornidge, Anna-Katharina. Edition Falkenberg, Bremen, pp. 35-38. ISBN 978-3-95494-134-6

Gärdes, Astrid (2018) Four Kings Islands: Marine Snow in a Centre of Biodiversity. In: Scientific Partnership for a Better Future. , ed. by Hempel, Gotthilf, Hempel, Irmtraut and Hornidge, Anna-Katharina. Edition Falkenberg, Bremen, pp. 17-20.

Gärdes, Astrid A, Schwieder, H.H. and Einsporn, M.H. (2013) Aquatic microorganisms: between producers, consumers and pathogens. In: Recent impulses to marine science and engineering. , ed. by Einsporn, M.H., Wiedling, J and Beilfuss, S. YOUMARES, 4 . German Society for Marine Research (DGM), Institute for Chemistry and Biology of the Marine Environment (ICBM), Bremen, pp. 29-46. ISBN 978-3-00-043157-9

Helfer, Véronique ORCID: https://orcid.org/0000-0001-5923-5291 and Hassenrück, Christiane (2021) Microbial communities in mangrove sediments. In: Dynamic Sedimentary Environments of Mangrove Coasts. . Elsevier, NA, pp. 141-175. ISBN 978-0-12-816437-2 DOI https://doi.org/10.1016/B978-0-12-816437-2.00003-3.

Reuter, Hauke ORCID: https://orcid.org/0000-0002-7751-9244, Breckwoldt, Annette ORCID: https://orcid.org/0000-0002-5976-4537, Dohna, Tina, Ferse, Sebastian ORCID: https://orcid.org/0000-0003-0930-5356, Gärdes, Astrid, Glaser, Marion ORCID: https://orcid.org/0000-0001-8910-900X, Huyghe, Filip, Kegler, Hauke, Knittweis, Leyla, Kochzius, Marc, Kraemer, Wiebke Elsbeth, Leins, Johannes, Lukman, Muhammad, Madduppa, Hawis, Nuryanto, Agus, Hui, Min, Minarro, Sara, Forero, Gabriela Navarrete, Paragay, Sainab Husain, Plass-Johnson, Jeremiah, Ratsimbazafy, Hajaniaina Andrianavalonarivo, Richter, Claudio, Sawall, Yvonne, Schwerdtner Máñez, Kathleen Schwerdtner, Teichberg, Mirta ORCID: https://orcid.org/0000-0003-1586-738X, Timm, Janne, van der Ven, Rosa and Jompa, Jamaluddin (2022) Coral reef social–ecological systems under pressure in Southern Sulawesi. In: Science for the Protection of Indonesian Coastal Ecosystems (SPICE). , ed. by Jennerjahn, Tim ORCID: https://orcid.org/0000-0003-1022-5126, Rixen, Tim, Irianto, Hari Eko and Samiaji, Joko. Elsevier, Amsterdam, pp. 143-199. DOI https://doi.org/10.1016/B978-0-12-815050-4.00005-5.