Article

Farag, Mohamed A., Saied, Doaa B., Afifi, Sherif M., Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332, Wessjohann, Ludger A., Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122, Kühnhold, Holger and Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 (2024) Metabolic responses of sea anemone and jellyfish to temperature and UV bleaching: Insights into stress adaptation using LCMS-based metabolomics, molecular networking and chemometrics. Journal of Advanced Research . DOI https://doi.org/10.1016/j.jare.2024.10.007.

Farag, Mohamed A., Baky, Mostafa H., Kühnhold, Holger, Kriege, Elisa A., Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332, Alseekh, Saleh, Al-Hammady, Montasser A., Ezz, Sara, Fernie, Alisdair R., Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 and Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 (2024) Effects of thermal and UV stress on the polar and non-polar metabolome of photosymbiotic jellyfish and sea anemones. Marine Pollution Bulletin, 208 . p. 116983. DOI https://doi.org/10.1016/j.marpolbul.2024.116983.

Kappelmann, Yannis ORCID: https://orcid.org/0000-0001-8566-5447, Sengupta, Meghna ORCID: https://orcid.org/0000-0002-3821-7235, Mann, Thomas ORCID: https://orcid.org/0000-0002-9182-2741, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Kneer, Dominik, Jompa, Jamaluddin and Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 (2024) Island accretion within a degraded reef ecosystem suggests adaptability to ecological transitions. Sedimentary Geology, 468 . p. 106675. DOI https://doi.org/10.1016/j.sedgeo.2024.106675.

Khalil, Munawar ORCID: https://orcid.org/0000-0002-8264-5317, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332 and Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 (2024) Simultaneous ocean acidification and warming do not alter the lipid-associated biochemistry but induce enzyme activities in an asterinid starfish. Science of The Total Environment, 932 . p. 173000. DOI https://doi.org/10.1016/j.scitotenv.2024.173000.

Harris, Joanna L., Embling, Clare B., Alexander, Genevieve, Curnick, David, Roche, Ronan, Froman, Niv, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Fileman, Elaine S., Hilbourne, Simon, Carter, Rebecca, Murray, Annie, Savage, Jessica and Stevens, Guy M.W. (2023) Intraspecific differences in short- and long-term foraging strategies of reef manta ray (Mobula alfredi) in the Chagos Archipelago. Global Ecology and Conservation, 46 . e02636. DOI https://doi.org/10.1016/j.gecco.2023.e02636.

Khalil, Munawar ORCID: https://orcid.org/0000-0002-8264-5317, Doo, Steve ORCID: https://orcid.org/0000-0002-3346-6152, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 and Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 (2023) Long-term physiological responses to combined ocean acidification and warming show energetic trade-offs in an asterinid starfish. Coral Reefs . DOI https://doi.org/10.1007/s00338-023-02388-2.

Perry, Chris T., Lange, Ines D. and Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 (2023) Quantifying reef-derived sediment generation: Introducing the SedBudget methodology to support tropical coastline and island vulnerability studies. Cambridge Prisms: Coastal Futures, 1 . DOI https://doi.org/10.1017/cft.2023.14.

Joppien, Marlena, Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122, Chandra, Viswasanthi, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 and Doo, Steve ORCID: https://orcid.org/0000-0002-3346-6152 (2022) Nanoplastic incorporation into an organismal skeleton. Scientific Reports, 12 (1). p. 14771. DOI https://doi.org/10.1038/s41598-022-18547-4.

Khalil, Munawar ORCID: https://orcid.org/0000-0002-8264-5317, Doo, Steve ORCID: https://orcid.org/0000-0002-3346-6152, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 and Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 (2022) Ocean Warming Amplifies the Effects of Ocean Acidification on Skeletal Mineralogy and Microstructure in the Asterinid Starfish Aquilonastra yairi. J. Mar. Sci. Eng., 10 (8). p. 1065. DOI https://doi.org/10.3390/jmse10081065.

Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Blank-Landeshammer, Bernhard, Meyer, Achim ORCID: https://orcid.org/0000-0002-4345-274X, Baumeister, Vera, Rahnenführer, Jörg, Sickmann, Albert and Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 (2022) Proteome-based clustering approaches reveal phylogenetic insights into Amphistegina. Journal of Earth Science, 33 (4). DOI https://doi.org/10.1007/s12583-022-1609-1.

Lange, Ines D., Perry, Chris T. and Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 (2022) Recovery trends of reef carbonate budgets at remote coral atolls 6 years post‐bleaching. Limnology and Oceanography, 68 (S1). pp. 8-22. DOI https://doi.org/10.1002/lno.12066.

Joppien, Marlena, Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 and Doo, Steve ORCID: https://orcid.org/0000-0002-3346-6152 (2022) Microplastics alter feeding strategies of a coral reef organism. Limnology and Oceanography Letters, 7 (2). pp. 131-139. DOI https://doi.org/10.1002/lol2.10237.

Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122, Murphy, Gary, Doo, Steve ORCID: https://orcid.org/0000-0002-3346-6152, Mann, Thomas ORCID: https://orcid.org/0000-0002-9182-2741, Petrovic, Alexander, Schmidt, Christiane ORCID: https://orcid.org/0000-0001-8461-3485 and Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 (2022) Ecosystem Design as an Avenue for Improving Services Provided by Carbonate Producing Marine Ecosystems. PeerJ . p. 12785. DOI https://doi.org/10.7717/peerj.12785.

Prazeres, Martina, Roberts, T. Edward, Ramadhani, Shadrina Fildzah, Doo, Steve ORCID: https://orcid.org/0000-0002-3346-6152, Schmidt, Christiane ORCID: https://orcid.org/0000-0001-8461-3485, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 and Renema, Willem (2021) Diversity and flexibility of algal symbiont community in globally distributed larger benthic foraminifera of the genus Amphistegina. BMC Microbiology, 21 (243). DOI https://doi.org/10.1186/s12866-021-02299-8.

Helber, Stephanie, Winters, Gidon, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Belshe, Elizabeth, Bröhl, Stefanie, Schmid, Michael, Reuter, Hauke ORCID: https://orcid.org/0000-0002-7751-9244 and Teichberg, Mirta ORCID: https://orcid.org/0000-0003-1586-738X (2021) Nutrient History Affects the Response and Resilience of the Tropical Seagrass Halophila stipulacea to Further Enrichment in Its Native Habitat. Frontiers in Plant Science, 12 . p. 1617.

Helber, Stephanie, Winters, Gidon, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Belshe, Elizabeth, Bröhl, Steffi, Schmid, Michael, Reuter, Hauke ORCID: https://orcid.org/0000-0002-7751-9244 and Teichberg, Mirta ORCID: https://orcid.org/0000-0003-1586-738X (2021) Nutrient History Affects the Response and Resilience of the Tropical Seagrass Halophila stipulacea to Further Enrichment in Its Native Habitat. Frontiers in Plant Science . DOI https://doi.org/10.3389/fpls.2021.678341.

Mann, Thomas ORCID: https://orcid.org/0000-0002-9182-2741, Wizemann, Andre, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Kappelmann, Yannis ORCID: https://orcid.org/0000-0001-8566-5447, Janßen, Alexander, Jompa, Jamaluddin and Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 (2021) Shallow-marine carbonate cementation in Holocene segments of the calcifying green alga Halimeda. Sedimentology, 69 (1). pp. 282-300. DOI https://doi.org/10.1111/sed.12927.

Fricke, Anna ORCID: https://orcid.org/0000-0003-1188-0114, Nguyen, X.V., Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Hoang, T.D., Dao, V.H., Tran, M.D., Pham, T.S., Le, H.C., Le, M.H., Pham, Q.L., Schmid, Michael, Kunzmann, Andreas ORCID: https://orcid.org/0000-0002-9500-4332, Gärdes, A., von Hagen, J. and Teichberg, Mirta ORCID: https://orcid.org/0000-0003-1586-738X (2021) Subtidal macrophyte diversity and potentials in Nha Trang Bay - baseline data for monitoring a rising natural resource. Estuarine, Coastal and Shelf Science, 259 . p. 107460. DOI https://doi.org/10.1016/j.ecss.2021.107460.

Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Cameron, Louise P., Blank-Landeshammer, Bernhard, Reymond, Claire E. ORCID: https://orcid.org/0000-0001-5669-3721, Doo, Steve S. ORCID: https://orcid.org/0000-0002-3346-6152, Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122, Sickmann, Albert and Ries, Justin B. (2021) Divergent Proteomic Responses Offer Insights into Resistant Physiological Responses of a Reef-Foraminifera to Climate Change Scenarios. Oceans, 2 (2). pp. 281-314. DOI https://doi.org/10.3390/oceans2020017.

Narayan, Gita R., Reymond, Claire E. ORCID: https://orcid.org/0000-0001-5669-3721, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Doo, Steve ORCID: https://orcid.org/0000-0002-3346-6152, Schmidt, Christiane ORCID: https://orcid.org/0000-0001-8461-3485, Mann, Thomas ORCID: https://orcid.org/0000-0002-9182-2741 and Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 (2021) Response of large benthic foraminifera to climate and local changes: Implications for future carbonate production. Sedimentology . DOI https://doi.org/10.1111/sed.12858.

Prazeres, Martina, Morard, Raphaël, Roberts, T. Edward, Doo, Steve ORCID: https://orcid.org/0000-0002-3346-6152, Schmidt, Christiane ORCID: https://orcid.org/0000-0001-8461-3485, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Renema, Willem, Kucera, Michal and Jompa, Jamaluddin (2020) High dispersal capacity and biogeographic breaks shape the genetic diversity of a globally-distributed reef-dwelling calcifier. Ecology and Evolution . pp. 1-14. DOI https://doi.org/10.1002/ece3.6335.

Hallmann, Christian, Nettersheim, Benjamin J., Brocks, Jochen J., Schwelm, Arne, Hope, Janet M., Not, Fabrice, Lomas, Michael, Schmidt, Christiane, Schiebel, Ralf, Nowack, Eva C. M., De Deckker, Patrick, Pawlowski, Jan, Bowser, Samuel S., Bobrovskiy, Ilya, Zonneveld, Karin, Kucera, Michal and Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 (2019) Reply to: Sources of C30 steroid biomarkers in Neoproterozoic–Cambrian rocks and oils. Nature Ecology & Evolution . DOI https://doi.org/10.1038/s41559-019-1049-1.

Nettersheim, Benjamin J., Brocks, Jochen J., Schwelm, Arne, Hope, Janet M., Not, Fabrice, Lomas, Michael, Schmidt, Christiane, Schiebel, Ralf, Nowack, Eva C. M., De Deckker, Patrick, Pawlowski, Jan, Bowser, Samuel S., Bobrovskiy, Ilya, Zonneveld, Karin, Kucera, Michal, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464 and Hallmann, Christian (2019) Putative sponge biomarkers in unicellular Rhizaria question an early rise of animals. Nature Ecology & Evolution, 3 . pp. 577-581. DOI https://doi.org/10.1038/s41559-019-0806-5.

Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Meyer, Achim ORCID: https://orcid.org/0000-0002-4345-274X, Reymond, Claire E ORCID: https://orcid.org/0000-0001-5669-3721, Narayan, Gita R., Rieder, Vera, Rahnenführer, Jörg, Kucera, Michal, Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122, Muhando, Christopher A. and Hallock, Pamela (2018) Variable thermal stress tolerance of the reef-associated symbiont-bearing foraminifera Amphistegina linked to differences in symbiont type. Coral Reefs, 37 (3). pp. 811-824. DOI https://doi.org/10.1007/s00338-018-1707-9.

Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Blank-Landeshammer, Bernhard, Reymond, Claire E. ORCID: https://orcid.org/0000-0001-5669-3721, Kollipara, Laxmikanth, Sickmann, Albert, Kucera, Michal and Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 (2018) Disentangling thermal stress responses in a reef-calcifier and its photosymbionts by shotgun proteomics. Scientific Reports, 8 . p. 3524. DOI https://doi.org/10.1038/s41598-018-21875-z.

Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Reymond, Claire ORCID: https://orcid.org/0000-0001-5669-3721, Rieder, Vera, Hallock, Pamela, Rahnenführer, Jörg, Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122 and Kucera, Michal (2017) Reef calcifiers are adapted to episodic heat stress but vulnerable to sustained warming. PLOS ONE, 12 (7). e0179753. DOI https://doi.org/10.1371/journal.pone.0179753.

Rieder, Vera, Blank-Landeshammer, Bernhard, Stuhr, Marleen ORCID: https://orcid.org/0000-0001-9155-9464, Schell, Tilman, Biß, Karsten, Kollipara, Laxmikanth, Meyer, Achim ORCID: https://orcid.org/0000-0002-4345-274X, Pfenninger, Markus, Westphal, Hildegard ORCID: https://orcid.org/0000-0001-7324-6122, Sickmann, Albert and Rahnenführer, Jörg (2017) DISMS2: A flexible algorithm for direct proteome- wide distance calculation of LC-MS/MS runs. BMC Bioinformatics, 18 (1). DOI https://doi.org/10.1186/s12859-017-1514-2.